CDS

Accession Number TCMCG010C07141
gbkey CDS
Protein Id XP_016560100.1
Location complement(join(141165033..141165305,141165880..141166049,141178901..141179012,141179139..141179193,141179319..141179434,141179727..141179808,141179891..141180145,141180294..141180422,141182042..141182301))
Gene LOC107859564
GeneID 107859564
Organism Capsicum annuum

Protein

Length 483aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319678
db_source XM_016704614.1
Definition PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Capsicum annuum]

EGGNOG-MAPPER Annotation

COG_category A
Description Pseudouridine synthase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006206        [VIEW IN EMBL-EBI]
GO:0006213        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008655        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009112        [VIEW IN EMBL-EBI]
GO:0009116        [VIEW IN EMBL-EBI]
GO:0009119        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009982        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019858        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043094        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0046087        [VIEW IN EMBL-EBI]
GO:0046131        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072527        [VIEW IN EMBL-EBI]
GO:0072528        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901657        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATTTTCTCCAGTGTCAGTTTAACTCCAATCTTGAGCAACAGTTGGATTGCTTCTCGTTTATGGACCCCAAATTGGAGAAATGGGGTTTTCTCCTCTCTAACTTTGGTTCACACATTTGCTTCAAGTGGTAGCCGTTTGCTGAAGAACAAGAATCACTACAAAAGATTGGTACTTTCTTGCTGCAGCAGAAGCTTCAGCTGGCAGGCCACTGCTTTGTCTCATACCAATTCAAATTCTCATGCTGTTTCCTCAAATGGCCAACTTAGTTATGGACGCTTGCTACCATGCCCTTTGGAGAATAGCCCACCAAGGGTTGAGCATCTTGTCGTCACCAAAGAAGGGCCTGTTCTAGAGTATATCTGTAAAGCTTTGGATCTTCCTCCATTATATGTGGAAGATCTTATACAGTTTGGGGCTGTGTATTACTCTCTTGTATGTCCCAAGCCACCTCCGACTGCCAGTCCTGAGCAAATTAAAGTGTATGAAGAAGTTACAGATCCATCAGTTCTGAGAAAGAGAGCTTCAATCAAAGGGAAAACTGTACGTGAAGCTCAGAAAACTTTCCGAATAACTCGTCCTGATGAAATTGTTGAAGCTGGAACTTATTTACGGGTGCATGTACACCCAAAGCGCTTTCCGAGGTGCTATCACATTGACTGGAAATCTCGTATTGTTGCTGTAACCGACGACTATGTGGTTCTGGACAAACCTGCTGGTACTTCTGTAGGAGGAACTACAGATAACATTGAAGAAAGCTGTGCTACATTTGCTACTCGAGCATTAGGATTTTCAGCTCCACTGCAGACTACCCATCAGATTGACAATTGTACTGAAGGATGTGTTGTGCTGGCTCGCAGCAAGGAGTACTGTTCAGTTTTTCATGGAAAAATCAGAGAAAAGAAGGTCAAAAAGCTTTATCTTGCTCTTGCTGCTGCGCCTGTTCCTGTTGGAATACTTACTCACTATATGCGTCCTATTAATATGGCCCCTAGACTTGTTTCTGAAGATTTTGTGAAAGGATGGTTATTGTGCCAACTTGAGGTTTTAGAATGCAAGAGAATACCCTGGCCTAGGAGTGAAATTCAGAGCAGATACAACCTTGCGGACTGTGGATGGGCTTTGAAGGACTTCGCATATGAGTGCCAAATCAACCTTCTAACCGGTCGGACTCATCAGATTCGAGCACAGTTAGCTGCCTGTAGTGCGCCGCTGGTAGGTGACTCAATGTATATGCCAGCTGCAATTGCTGAAATGGTCAGTCCTGGGAGCAATCCATTTGGGAAGAACAAAAAACTATGTACAAACGAAAATGATAGATCACTTACGATCGATGAGTGGATAGCACAACATGGGAAGGAACCTAGTGTTGCTGTAGGTCTTCAGGCATGCCAGATTTCGTGGGATGATGGCAAACACTGCTATGGTGCTAGATCACCTTGGTGGAGGTAG
Protein:  
MIFSSVSLTPILSNSWIASRLWTPNWRNGVFSSLTLVHTFASSGSRLLKNKNHYKRLVLSCCSRSFSWQATALSHTNSNSHAVSSNGQLSYGRLLPCPLENSPPRVEHLVVTKEGPVLEYICKALDLPPLYVEDLIQFGAVYYSLVCPKPPPTASPEQIKVYEEVTDPSVLRKRASIKGKTVREAQKTFRITRPDEIVEAGTYLRVHVHPKRFPRCYHIDWKSRIVAVTDDYVVLDKPAGTSVGGTTDNIEESCATFATRALGFSAPLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAAAPVPVGILTHYMRPINMAPRLVSEDFVKGWLLCQLEVLECKRIPWPRSEIQSRYNLADCGWALKDFAYECQINLLTGRTHQIRAQLAACSAPLVGDSMYMPAAIAEMVSPGSNPFGKNKKLCTNENDRSLTIDEWIAQHGKEPSVAVGLQACQISWDDGKHCYGARSPWWR